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ALOX15B arachidonate 15-lipoxygenase type B [ Ursus arctos (brown bear) ]

Gene ID: 113271172, updated on 15-Mar-2024

Summary

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Gene symbol
ALOX15B
Gene description
arachidonate 15-lipoxygenase type B
See related
EnsemblRapid:ENSUARG00005018990
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See ALOX15B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622808.1 (9533702..9542115, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929761.1 (62115463..62124546)

NW_026622808.1Genomic Context describing neighboring genes Neighboring gene arachidonate epidermal lipoxygenase 3 Neighboring gene arachidonate 12-lipoxygenase, 12R type Neighboring gene guanylate cyclase 2D, retinal Neighboring gene centrobin, centriole duplication and spindle assembly protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate 15-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyunsaturated fatty acid lipoxygenase ALOX15B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622808.1 Reference UrsArc2.0 Primary Assembly

    Range
    9533702..9542115 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048226988.2 → XP_048082945.1  polyunsaturated fatty acid lipoxygenase ALOX15B

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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