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SLC35F6 solute carrier family 35 member F6 [ Ursus arctos (brown bear) ]

Gene ID: 113270893, updated on 15-Mar-2024

Summary

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Gene symbol
SLC35F6
Gene description
solute carrier family 35 member F6
See related
EnsemblRapid:ENSUARG00005016743
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See SLC35F6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026623100.1 (65095961..65113049, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929672.1 (64476525..64493726, complement)

NW_026623100.1Genomic Context describing neighboring genes Neighboring gene dihydropyrimidinase like 5 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene centromere protein A Neighboring gene potassium two pore domain channel subfamily K member 3 Neighboring gene uncharacterized LOC130543130 Neighboring gene calcium and integrin binding family member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 35 member F6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026623100.1 Reference UrsArc2.0 Primary Assembly

    Range
    65095961..65113049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026520499.4 → XP_026376284.1  solute carrier family 35 member F6 isoform X1

    Related
    ENSUARP00005025242.1
    Conserved Domains (2) summary
    COG0697
    Location:52 → 340
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    pfam06027
    Location:95 → 222
    SLC35F; Solute carrier family 35

  2. XM_044390724.3 → XP_044246659.1  solute carrier family 35 member F6 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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