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HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [ Ursus arctos (brown bear) ]

Gene ID: 113270781, updated on 15-Mar-2024

Summary

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Gene symbol
HADHB
Gene description
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
See related
EnsemblRapid:ENSUARG00005015243
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See HADHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026623100.1 (65511228..65546367, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929672.1 (64880562..64926790, complement)

NW_026623100.1Genomic Context describing neighboring genes Neighboring gene selenoprotein I Neighboring gene adhesion G protein-coupled receptor F3 Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha Neighboring gene GRB2 associated regulator of MAPK1 subtype 2 Neighboring gene RAB10, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trifunctional enzyme subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026623100.1 Reference UrsArc2.0 Primary Assembly

    Range
    65511228..65546367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057309138.1 → XP_057165121.1  trifunctional enzyme subunit beta, mitochondrial isoform X7

  2. XM_057309137.1 → XP_057165120.1  trifunctional enzyme subunit beta, mitochondrial isoform X6

  3. XM_057309136.1 → XP_057165119.1  trifunctional enzyme subunit beta, mitochondrial isoform X3

  4. XM_026520304.4 → XP_026376089.1  trifunctional enzyme subunit beta, mitochondrial isoform X5

    Related
    ENSUARP00005023234.1
    Conserved Domains (1) summary
    cd00751
    Location:56 → 472
    thiolase; Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and ...

  5. XM_048222776.2 → XP_048078733.1  trifunctional enzyme subunit beta, mitochondrial isoform X4

  6. XM_057309135.1 → XP_057165118.1  trifunctional enzyme subunit beta, mitochondrial isoform X2

  7. XM_057309134.1 → XP_057165117.1  trifunctional enzyme subunit beta, mitochondrial isoform X1

Nucleotide Protein
Heading Accession and Version

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