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POMT2 protein O-mannosyltransferase 2 [ Ursus arctos (brown bear) ]

Gene ID: 113270293, updated on 15-Mar-2024

Summary

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Gene symbol
POMT2
Gene description
protein O-mannosyltransferase 2
See related
EnsemblRapid:ENSUARG00005010652
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See POMT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622930.1 (24075998..24119260)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929595.1 (43573421..43616708)

NW_026622930.1Genomic Context describing neighboring genes Neighboring gene NADP dependent oxidoreductase domain containing 1 Neighboring gene sterile alpha motif domain containing 15 Neighboring gene 60S ribosomal protein L37-like Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene glutathione S-transferase zeta 1 Neighboring gene neuroglobin Neighboring gene transmembrane protein 63C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622930.1 Reference UrsArc2.0 Primary Assembly

    Range
    24075998..24119260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057318316.1 → XP_057174299.1  protein O-mannosyl-transferase 2 isoform X4

  2. XM_044391302.3 → XP_044247237.1  protein O-mannosyl-transferase 2 isoform X2

    Related
    ENSUARP00005016131.1
    Conserved Domains (1) summary
    COG1928
    Location:130 → 773
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

  3. XM_026519432.4 → XP_026375217.1  protein O-mannosyl-transferase 2 isoform X1

    Related
    ENSUARP00005016084.1

  4. XM_044391303.3 → XP_044247238.1  protein O-mannosyl-transferase 2 isoform X3

    Conserved Domains (1) summary
    COG1928
    Location:2 → 659
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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Gene LinkOut

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