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PGAP2 post-GPI attachment to proteins 2 [ Ursus arctos (brown bear) ]

Gene ID: 113269251, updated on 15-Mar-2024

Summary

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Gene symbol
PGAP2
Gene description
post-GPI attachment to proteins 2
See related
EnsemblRapid:ENSUARG00005014234
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See PGAP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622897.1 (55933158..55957478)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025930345.1 (7033116..7055792, complement)

NW_026622897.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 10 subunit Neighboring gene uncharacterized LOC130544604 Neighboring gene ADP-ribosyltransferase 5 Neighboring gene nucleoporin 98 and 96 precursor Neighboring gene ras homolog family member G Neighboring gene 40S ribosomal protein S26-like Neighboring gene stromal interaction molecule 1 Neighboring gene U6 spliceosomal RNA Neighboring gene ribonucleotide reductase catalytic subunit M1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622897.1 Reference UrsArc2.0 Primary Assembly

    Range
    55933158..55957478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057316762.1 → XP_057172745.1  post-GPI attachment to proteins factor 2 isoform X1

  2. XM_026517962.4 → XP_026373747.1  post-GPI attachment to proteins factor 2 isoform X1

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 245
    Frag1; Frag1/DRAM/Sfk1 family

  3. XM_048217318.2 → XP_048073275.1  post-GPI attachment to proteins factor 2 isoform X2

  4. XM_048217323.2 → XP_048073280.1  post-GPI attachment to proteins factor 2 isoform X4

  5. XM_026517966.4 → XP_026373751.1  post-GPI attachment to proteins factor 2 isoform X1

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 245
    Frag1; Frag1/DRAM/Sfk1 family

  6. XM_026517963.4 → XP_026373748.1  post-GPI attachment to proteins factor 2 isoform X1

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 245
    Frag1; Frag1/DRAM/Sfk1 family

  7. XM_048217320.2 → XP_048073277.1  post-GPI attachment to proteins factor 2 isoform X3

  8. XM_026517972.4 → XP_026373757.1  post-GPI attachment to proteins factor 2 isoform X2

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 241
    Frag1; Frag1/DRAM/Sfk1 family

  9. XM_026517974.4 → XP_026373759.1  post-GPI attachment to proteins factor 2 isoform X4

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 237
    Frag1; Frag1/DRAM/Sfk1 family

  10. XM_026517975.4 → XP_026373760.1  post-GPI attachment to proteins factor 2 isoform X5

    Conserved Domains (1) summary
    pfam10277
    Location:90 → 302
    Frag1; Frag1/DRAM/Sfk1 family
Nucleotide Protein
Heading Accession and Version

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