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ACAN aggrecan [ Ursus arctos (brown bear) ]

Gene ID: 113263578, updated on 15-Mar-2024

Summary

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Gene symbol
ACAN
Gene description
aggrecan
See related
EnsemblRapid:ENSUARG00005013882
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See ACAN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622963.1 (32527609..32589996)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929496.1 (6419171..6480948, complement)

NW_026622963.1Genomic Context describing neighboring genes Neighboring gene DET1 partner of COP1 E3 ubiquitin ligase Neighboring gene interferon stimulated exonuclease gene 20 Neighboring gene apoptosis enhancing nuclease Neighboring gene hyaluronan and proteoglycan link protein 3 Neighboring gene milk fat globule EGF and factor V/VIII domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aggrecan core protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622963.1 Reference UrsArc2.0 Primary Assembly

    Range
    32527609..32589996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026510275.4 → XP_026366060.2  aggrecan core protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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