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FAM20B FAM20B glycosaminoglycan xylosylkinase [ Ursus arctos (brown bear) ]

Gene ID: 113262775, updated on 15-Mar-2024

Summary

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Gene symbol
FAM20B
Gene description
FAM20B glycosaminoglycan xylosylkinase
See related
EnsemblRapid:ENSUARG00005009968
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See FAM20B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622874.1 (19199048..19240987)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929717.1 (50874457..50913696, complement)

NW_026622874.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin like 1 Neighboring gene uncharacterized LOC130544353 Neighboring gene torsin family 3 member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene 40S ribosomal protein S2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosaminoglycan xylosylkinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622874.1 Reference UrsArc2.0 Primary Assembly

    Range
    19199048..19240987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048224870.2 → XP_048080827.1  glycosaminoglycan xylosylkinase

  2. XM_044387887.3 → XP_044243822.1  glycosaminoglycan xylosylkinase

    Related
    ENSUARP00005015039.1
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_057315706.1 → XP_057171689.1  glycosaminoglycan xylosylkinase

  4. XM_057315708.1 → XP_057171691.1  glycosaminoglycan xylosylkinase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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