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CRPPA CDP-L-ribitol pyrophosphorylase A [ Ursus arctos (brown bear) ]

Gene ID: 113260950, updated on 15-Mar-2024

Summary

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Gene symbol
CRPPA
Gene description
CDP-L-ribitol pyrophosphorylase A
See related
EnsemblRapid:ENSUARG00005000823
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Also known as
ISPD
Orthologs
human mouse all
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Genomic context

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See CRPPA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622985.1 (45710021..46015642, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929795.1 (45027164..45337387, complement)

NW_026622985.1Genomic Context describing neighboring genes Neighboring gene ferritin light chain-like Neighboring gene 40S ribosomal protein S6-like Neighboring gene small nucleolar RNA U13 Neighboring gene Y-box-binding protein 1-like Neighboring gene sclerostin domain containing 1 Neighboring gene leucine rich repeat containing 72

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribitol-5-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D-ribitol-5-phosphate cytidylyltransferase
Names
isoprenoid synthase domain containing

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622985.1 Reference UrsArc2.0 Primary Assembly

    Range
    45710021..46015642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057304543.1 → XP_057160526.1  D-ribitol-5-phosphate cytidylyltransferase isoform X1

  2. XM_057304542.1 → XP_057160525.1  D-ribitol-5-phosphate cytidylyltransferase isoform X2

  3. XM_057304541.1 → XP_057160524.1  D-ribitol-5-phosphate cytidylyltransferase isoform X1

  4. XM_048213153.2 → XP_048069110.1  D-ribitol-5-phosphate cytidylyltransferase isoform X1

  5. XM_026506908.4 → XP_026362693.1  D-ribitol-5-phosphate cytidylyltransferase isoform X1

    Related
    ENSUARP00005001195.1
    Conserved Domains (2) summary
    cd02516
    Location:50 → 269
    CDP-ME_synthetase; CDP-ME synthetase is involved in mevalonate-independent isoprenoid production
    pfam18706
    Location:279 → 447
    ISPD_C; D-ribitol-5-phosphate cytidylyltransferase C-terminal domain
Nucleotide Protein
Heading Accession and Version

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