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GALNT15 polypeptide N-acetylgalactosaminyltransferase 15 [ Ursus arctos (brown bear) ]

Gene ID: 113253903, updated on 15-Mar-2024

Summary

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Gene symbol
GALNT15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
EnsemblRapid:ENSUARG00005010298
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See GALNT15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622875.1 (32303381..32351095)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025930127.1 (24828155..24879124, complement)

NW_026622875.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113253906 Neighboring gene uncharacterized LOC125282046 Neighboring gene uncharacterized LOC113253908 Neighboring gene uncharacterized LOC130544399 Neighboring gene diphthamide biosynthesis 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622875.1 Reference UrsArc2.0 Primary Assembly

    Range
    32303381..32351095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026496955.4 → XP_026352740.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X2

    Related
    ENSUARP00005015666.1

  2. XM_026496956.4 → XP_026352741.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X4

  3. XM_044383378.3 → XP_044239313.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:193 → 492
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:506 → 629
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  4. XM_044383379.3 → XP_044239314.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X3

    Conserved Domains (2) summary
    cd00161
    Location:430 → 553
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl11394
    Location:227 → 416
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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