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CHST15 carbohydrate sulfotransferase 15 [ Ursus arctos (brown bear) ]

Gene ID: 113252027, updated on 15-Mar-2024

Summary

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Gene symbol
CHST15
Gene description
carbohydrate sulfotransferase 15
See related
EnsemblRapid:ENSUARG00005013252
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See CHST15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026623089.1 (7670548..7761961)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929562.1 (7929128..8008268)

NW_026623089.1Genomic Context describing neighboring genes Neighboring gene ornithine aminotransferase Neighboring gene histidine-rich glycoprotein-like Neighboring gene carboxypeptidase X, M14 family member 2 Neighboring gene G protein-coupled receptor 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026623089.1 Reference UrsArc2.0 Primary Assembly

    Range
    7670548..7761961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057308560.1 → XP_057164543.1  carbohydrate sulfotransferase 15

  2. XM_026494336.4 → XP_026350121.1  carbohydrate sulfotransferase 15

    Conserved Domains (1) summary
    cl21551
    Location:253 → 511
    Sulfotransfer_3; Sulfotransferase family

  3. XM_048219067.2 → XP_048075024.1  carbohydrate sulfotransferase 15

  4. XM_057308561.1 → XP_057164544.1  carbohydrate sulfotransferase 15

  5. XM_044382232.3 → XP_044238167.1  carbohydrate sulfotransferase 15

    Conserved Domains (1) summary
    cl21551
    Location:253 → 511
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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