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INPP5F inositol polyphosphate-5-phosphatase F [ Ursus arctos (brown bear) ]

Gene ID: 113252001, updated on 15-Mar-2024

Summary

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Gene symbol
INPP5F
Gene description
inositol polyphosphate-5-phosphatase F
See related
EnsemblRapid:ENSUARG00005015369
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See INPP5F in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026623089.1 (11173323..11257137, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929562.1 (11420329..11502994, complement)

NW_026623089.1Genomic Context describing neighboring genes Neighboring gene SEC23 interacting protein Neighboring gene 60S ribosomal protein L13-like Neighboring gene minichromosome maintenance complex binding protein Neighboring gene uncharacterized LOC113251999 Neighboring gene uncharacterized LOC123000758 Neighboring gene uncharacterized LOC130542982 Neighboring gene BAG cochaperone 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in clathrin-coated endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026623089.1 Reference UrsArc2.0 Primary Assembly

    Range
    11173323..11257137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026494259.4 → XP_026350044.2  phosphatidylinositide phosphatase SAC2 isoform X1

  2. XM_044382196.3 → XP_044238131.2  phosphatidylinositide phosphatase SAC2 isoform X4

  3. XM_044382194.3 → XP_044238129.2  phosphatidylinositide phosphatase SAC2 isoform X2

  4. XM_044382195.3 → XP_044238130.2  phosphatidylinositide phosphatase SAC2 isoform X3

  5. XM_048218879.2 → XP_048074836.1  phosphatidylinositide phosphatase SAC2 isoform X5

  6. XM_048218880.2 → XP_048074837.1  phosphatidylinositide phosphatase SAC2 isoform X6

  7. XM_057308322.1 → XP_057164305.1  phosphatidylinositide phosphatase SAC2 isoform X7

  8. XM_026494263.4 → XP_026350048.2  phosphatidylinositide phosphatase SAC2 isoform X8

  9. XM_026494265.4 → XP_026350050.2  phosphatidylinositide phosphatase SAC2 isoform X9

Nucleotide Protein
Heading Accession and Version

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