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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Ursus arctos (brown bear) ]

Gene ID: 113250428, updated on 15-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
EnsemblRapid:ENSUARG00005000195
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026623056.1 (50885631..50946121, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929905.1 (49176251..49237247, complement)

NW_026623056.1Genomic Context describing neighboring genes Neighboring gene non-histone chromosomal protein HMG-17-like Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene small nucleolar RNA SNORA20 Neighboring gene uncharacterized LOC123000643 Neighboring gene uncharacterized LOC130542606 Neighboring gene uncharacterized LOC113250400 Neighboring gene soma ferritin-like Neighboring gene uncharacterized LOC130542607

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026623056.1 Reference UrsArc2.0 Primary Assembly

    Range
    50885631..50946121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026491891.4 → XP_026347676.1  type 2 lactosamine alpha-2,3-sialyltransferase

    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_026491872.4 → XP_026347657.1  type 2 lactosamine alpha-2,3-sialyltransferase

    Related
    ENSUARP00005000214.1
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_044381359.3 → XP_044237294.1  type 2 lactosamine alpha-2,3-sialyltransferase

    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_026491901.4 → XP_026347686.1  type 2 lactosamine alpha-2,3-sialyltransferase

    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_026491920.4 → XP_026347705.1  type 2 lactosamine alpha-2,3-sialyltransferase

    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_026491910.4 → XP_026347695.1  type 2 lactosamine alpha-2,3-sialyltransferase

    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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