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PNPLA7 patatin like phospholipase domain containing 7 [ Ursus arctos (brown bear) ]

Gene ID: 113248431, updated on 15-Mar-2024

Summary

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Gene symbol
PNPLA7
Gene description
patatin like phospholipase domain containing 7
See related
EnsemblRapid:ENSUARG00005018478 EnsemblRapid:ENSUARG00005022932
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See PNPLA7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
37
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622852.1 (60435667..60503815, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929683.1 (59557064..59625169, complement)

NW_026622852.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123000500 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 8 Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene diphthamide biosynthesis 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: patatin-like phospholipase domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622852.1 Reference UrsArc2.0 Primary Assembly

    Range
    60435667..60503815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044380547.3 → XP_044236482.1  LOW QUALITY PROTEIN: patatin-like phospholipase domain-containing protein 7

    Related
    ENSUARP00005030251.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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