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GBE1 1,4-alpha-glucan branching enzyme 1 [ Ursus arctos (brown bear) ]

Gene ID: 113247670, updated on 15-Mar-2024

Summary

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Gene symbol
GBE1
Gene description
1,4-alpha-glucan branching enzyme 1
See related
EnsemblRapid:ENSUARG00005001573
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See GBE1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026623056.1 (62040694..62303496)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929905.1 (60414890..60680007)

NW_026623056.1Genomic Context describing neighboring genes Neighboring gene tubulin beta-4B chain-like Neighboring gene uncharacterized LOC130542664 Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene 60S ribosomal protein L35a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-alpha-glucan branching enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-alpha-glucan-branching enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026623056.1 Reference UrsArc2.0 Primary Assembly

    Range
    62040694..62303496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026488982.4 → XP_026344767.1  1,4-alpha-glucan-branching enzyme isoform X2

    Related
    ENSUARP00005002491.1
    Conserved Domains (1) summary
    PLN02447
    Location:27 → 696
    PLN02447; 1,4-alpha-glucan-branching enzyme

  2. XM_057306804.1 → XP_057162787.1  1,4-alpha-glucan-branching enzyme isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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