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PPT2 palmitoyl-protein thioesterase 2 [ Ursus arctos (brown bear) ]

Gene ID: 113243752, updated on 15-Mar-2024

Summary

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Gene symbol
PPT2
Gene description
palmitoyl-protein thioesterase 2
See related
EnsemblRapid:ENSUARG00005018251
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See PPT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622997.1 (27407388..27418272)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929728.1 (7885298..7893954, complement)

NW_026622997.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 beta Neighboring gene FKBP prolyl isomerase like Neighboring gene proline rich transmembrane protein 1 Neighboring gene EGF like domain multiple 8 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene ring finger protein 5 Neighboring gene advanced glycosylation end-product specific receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal thioesterase PPT2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622997.1 Reference UrsArc2.0 Primary Assembly

    Range
    27407388..27418272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057304818.1 → XP_057160801.1  lysosomal thioesterase PPT2 isoform X1

  2. XM_044378254.3 → XP_044234189.2  lysosomal thioesterase PPT2 isoform X3

  3. XM_044378252.3 → XP_044234187.2  lysosomal thioesterase PPT2 isoform X3

  4. XM_026482567.4 → XP_026338352.2  lysosomal thioesterase PPT2 isoform X2

  5. XM_026482571.4 → XP_026338356.2  lysosomal thioesterase PPT2 isoform X3

  6. XM_026482569.4 → XP_026338354.2  lysosomal thioesterase PPT2 isoform X3

  7. XM_057304819.1 → XP_057160802.1  lysosomal thioesterase PPT2 isoform X3

  8. XM_026482568.4 → XP_026338353.2  lysosomal thioesterase PPT2 isoform X3

  9. XM_044378253.3 → XP_044234188.2  lysosomal thioesterase PPT2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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