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PRKCSH PRKCSH beta subunit of glucosidase II [ Ursus arctos (brown bear) ]

Gene ID: 113243027, updated on 15-Mar-2024

Summary

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Gene symbol
PRKCSH
Gene description
PRKCSH beta subunit of glucosidase II
See related
EnsemblRapid:ENSUARG00005003909
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See PRKCSH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622808.1 (19911762..19922838)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929761.1 (51040541..51051626, complement)

NW_026622808.1Genomic Context describing neighboring genes Neighboring gene ral guanine nucleotide dissociation stimulator like 3 Neighboring gene uncharacterized LOC130543591 Neighboring gene outer dynein arm docking complex subunit 3 Neighboring gene ELAV like RNA binding protein 3 Neighboring gene zinc finger protein 653 Neighboring gene ECSIT signaling integrator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosidase 2 subunit beta
Names
protein kinase C substrate 80K-H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622808.1 Reference UrsArc2.0 Primary Assembly

    Range
    19911762..19922838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026481475.4 → XP_026337260.1  glucosidase 2 subunit beta isoform X1

    Related
    ENSUARP00005005794.1

  2. XM_048227130.2 → XP_048083087.1  glucosidase 2 subunit beta isoform X2

  3. XM_026481476.4 → XP_026337261.1  glucosidase 2 subunit beta isoform X1

  4. XM_044377908.3 → XP_044233843.1  glucosidase 2 subunit beta isoform X2

    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:383 → 511
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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