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ACSL4 acyl-CoA synthetase long chain family member 4 [ Ursus arctos (brown bear) ]

Gene ID: 113241237, updated on 15-Mar-2024

Summary

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Gene symbol
ACSL4
Gene description
acyl-CoA synthetase long chain family member 4
See related
EnsemblRapid:ENSUARG00005004469
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) X NC_079873.1 (85455339..85530751, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929817.1 (86645483..86770357, complement)

Chromosome X - NC_079873.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S6-like Neighboring gene uncharacterized LOC130544038 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 5 Neighboring gene transmembrane protein 164 Neighboring gene AMMECR nuclear protein 1 Neighboring gene retrotransposon Gag like 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NC_079873.1 Reference UrsArc2.0 Primary Assembly

    Range
    85455339..85530751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026478816.4 → XP_026334601.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    Conserved Domains (1) summary
    cd17639
    Location:80 → 655
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  2. XM_026478814.4 → XP_026334599.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    Conserved Domains (1) summary
    cd17639
    Location:121 → 696
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  3. XM_026478817.4 → XP_026334602.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    Conserved Domains (1) summary
    cd17639
    Location:80 → 655
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  4. XM_026478815.4 → XP_026334600.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    Related
    ENSUARP00005006702.1
    Conserved Domains (1) summary
    cd17639
    Location:80 → 655
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  5. XM_048213761.2 → XP_048069718.1  long-chain-fatty-acid--CoA ligase 4 isoform X3

  6. XM_048213760.2 → XP_048069717.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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