U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MIR11399 microRNA 11399 [ Homo sapiens (human) ]

Gene ID: 113218506, updated on 10-Oct-2023

Summary

Official Symbol
MIR11399provided by HGNC
Official Full Name
microRNA 11399provided by HGNC
Primary source
HGNC:HGNC:54019
See related
miRBase:MI0036558; AllianceGenome:HGNC:54019
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See MIR11399 in Genome Data Viewer
Location:
1p13.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (112882050..112882129)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (112894624..112894703)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (113424672..113424751)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113363733-113364462 Neighboring gene long intergenic non-protein coding RNA 1356 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113385908-113386857 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113388166-113388800 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113388801-113389435 Neighboring gene uncharacterized LOC105378911 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113407421-113407930 Neighboring gene MPRA-validated peak371 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:113408443-113408952 Neighboring gene Sharpr-MPRA regulatory region 5001 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:113420877-113421474 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113423468-113424388 Neighboring gene uncharacterized LOC124904342 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:113440206-113440749 Neighboring gene ribosomal protein L39 pseudogene 8 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113444917-113445850 Neighboring gene Sharpr-MPRA regulatory region 4510 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113448786-113449345 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113453686-113454297 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:113454298-113454908 Neighboring gene solute carrier family 16 member 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_162120.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL390729

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    112882050..112882129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    112894624..112894703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)