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LOC113213496 delta-sarcoglycan [ Frankliniella occidentalis (western flower thrips) ]

Gene ID: 113213496, updated on 10-May-2024

Summary

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Gene symbol
LOC113213496
Gene description
delta-sarcoglycan
Locus tag
FOCC_FOCC000029
Gene type
protein coding
RefSeq status
MODEL
Organism
Frankliniella occidentalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Thysanoptera; Terebrantia; Thripoidea; Thripidae; Frankliniella
Orthologs
fruit fly all
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Genomic context

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See LOC113213496 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Focc_3.1 (GCF_000697945.3) Unplaced Scaffold NW_026267131.1 (721783..805508, complement)
100 previous assembly Focc_2.1 (GCF_000697945.2) Unplaced Scaffold NW_020292687.1 (1478715..1542173)

NW_026267131.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113213502 Neighboring gene multiple inositol polyphosphate phosphatase 1-like Neighboring gene uncharacterized LOC113213476 Neighboring gene uncharacterized LOC127750440 Neighboring gene uncharacterized LOC127750414 Neighboring gene uncharacterized LOC113213479 Neighboring gene transaldolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics and the evolution of hemipteroid insects. Johnson KP, et al. Proc Natl Acad Sci U S A, 2018 Dec 11. PMID 30478043, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Frankliniella occidentalis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Focc_3.1 Primary Assembly

Genomic

  1. NW_026267131.1 Reference Focc_3.1 Primary Assembly

    Range
    721783..805508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052272039.1 → XP_052127999.1  delta-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A9C6X2K3

  2. XM_052272006.1 → XP_052127966.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A9C6X2K0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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