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LOC113210970 leukotriene A-4 hydrolase [ Frankliniella occidentalis (western flower thrips) ]

Gene ID: 113210970, updated on 10-May-2024

Summary

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Gene symbol
LOC113210970
Gene description
leukotriene A-4 hydrolase
Locus tag
FOCC_FOCC006351
Gene type
protein coding
RefSeq status
MODEL
Organism
Frankliniella occidentalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Thysanoptera; Terebrantia; Thripoidea; Thripidae; Frankliniella
Orthologs
fruit fly all
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Genomic context

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See LOC113210970 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Focc_3.1 (GCF_000697945.3) Unplaced Scaffold NW_026267183.1 (922942..926271, complement)
100 previous assembly Focc_2.1 (GCF_000697945.2) Unplaced Scaffold NW_020292490.1 (127161..130502)

NW_026267183.1Genomic Context describing neighboring genes Neighboring gene UDP-glucose 4-epimerase-like Neighboring gene Methyltransferase like 4 Neighboring gene store-operated calcium entry regulator STIMATE Neighboring gene mitochondrial ribosomal protein L13 Neighboring gene uncharacterized LOC113210963 Neighboring gene uncharacterized LOC113210961

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the salivary gland transcriptome of Frankliniella occidentalis. Stafford-Banks CA, et al. PLoS One, 2014. PMID 24736614, Free PMC Article
  2. Phylogenomics and the evolution of hemipteroid insects. Johnson KP, et al. Proc Natl Acad Sci U S A, 2018 Dec 11. PMID 30478043, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables epoxide hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leukotriene A-4 hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Frankliniella occidentalis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Focc_3.1 Primary Assembly

Genomic

  1. NW_026267183.1 Reference Focc_3.1 Primary Assembly

    Range
    922942..926271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026429187.2 → XP_026284972.1  leukotriene A-4 hydrolase

    UniProtKB/TrEMBL
    A0A6J1SVR7
    Conserved Domains (1) summary
    TIGR02411
    Location:10 → 613
    leuko_A4_hydro; leukotriene A-4 hydrolase/aminopeptidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases