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Ccr8 C-C motif chemokine receptor 8 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113191752, updated on 15-Mar-2024

Summary

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Gene symbol
Ccr8
Gene description
C-C motif chemokine receptor 8
See related
Ensembl:ENSUPAG00010010938
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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See Ccr8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540139.1 (906515..907582)

NW_020540139.1Genomic Context describing neighboring genes Neighboring gene xin actin binding repeat containing 1 Neighboring gene C-X3-C motif chemokine receptor 1 Neighboring gene solute carrier family 25 member 38 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene ribosomal protein SA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020540139 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-C chemokine receptor type 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540139.1 Reference ASM342692v1

    Range
    906515..907582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026401583.1 → XP_026257368.1  C-C chemokine receptor type 8

    UniProtKB/TrEMBL
    A0A8D2HLU3
    Related
    ENSUPAP00010013537.1, ENSUPAT00010015505.1
    Conserved Domains (2) summary
    cd15187
    Location:38 → 62
    7tmA_CCR8; TM helix 1 [structural motif]
    cl28897
    Location:36 → 311
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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