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LOC113159230 transportin-2 [ Anabas testudineus (climbing perch) ]

Gene ID: 113159230, updated on 14-Dec-2023

Summary

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Gene symbol
LOC113159230
Gene description
transportin-2
See related
Ensembl:ENSATEG00000024761
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Also known as
tnpo2
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Genomic context

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See LOC113159230 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
26
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 8 NC_046617.1 (15405351..15418359)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020535982.1 (15405351..15418359)

Chromosome 8 - NC_046617.1Genomic Context describing neighboring genes Neighboring gene relaxin-3-like Neighboring gene interleukin 12 receptor, beta 2a, like Neighboring gene small nucleolar RNA SNORD41 Neighboring gene small nucleolar RNA SNORD41 Neighboring gene F-box and WD repeat domain containing 9 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transportin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046617.1 Reference fAnaTes1.2 Primary Assembly

    Range
    15405351..15418359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026355832.1 → XP_026211617.1  transportin-2

    UniProtKB/TrEMBL
    A0A3Q1JX54

  2. XM_026355825.1 → XP_026211610.1  transportin-2

    UniProtKB/TrEMBL
    A0A3Q1JX54
    Related
    ENSATEP00000036024.2, ENSATET00000036538.2

  3. XM_026355840.1 → XP_026211625.1  transportin-2

    UniProtKB/TrEMBL
    A0A3Q1JX54
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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