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rpl23a ribosomal protein L23a [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113142961, updated on 15-Mar-2024

Summary

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Gene symbol
rpl23a
Gene description
ribosomal protein L23a
See related
Ensembl:ENSMAMG00000025567
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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See rpl23a in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 14 NC_046646.1 (12953372..12955690)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535942.1 (12953372..12955690)

Chromosome 14 - NC_046646.1Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 6 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 Neighboring gene small nucleolar RNA Z17 Neighboring gene small nucleolar RNA SNORD42 Neighboring gene baculoviral IAP repeat containing 2 Neighboring gene transcriptional coactivator YAP1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L23a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046646.1 Reference fMasArm1.2 Primary Assembly

    Range
    12953372..12955690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026328348.1 → XP_026184133.1  60S ribosomal protein L23a

    UniProtKB/TrEMBL
    A0A7N8WVA9, A0A7N8X752
    Related
    ENSMAMP00000046669.1, ENSMAMT00000054285.1
    Conserved Domains (1) summary
    PTZ00191
    Location:50 → 170
    PTZ00191; 60S ribosomal protein L23a; Provisional
Nucleotide Protein
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