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hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Carassius auratus (goldfish) ]

Gene ID: 113121288, updated on 9-Nov-2023

Summary

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Gene symbol
hs3st5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
See related
Ensembl:ENSCARG00000040172
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See hs3st5 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 20 NC_039262.1 (25695186..25705006, complement)

Chromosome 20 - NC_039262.1Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene collagen, type X, alpha 1b Neighboring gene fyn-related Src family tyrosine kinase Neighboring gene prospero homeobox protein 1-like Neighboring gene uncharacterized LOC113121290

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039262.1 Chromosome 20 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039262.1 Reference ASM336829v1 Primary Assembly

    Range
    25695186..25705006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026291631.1 → XP_026147416.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A6P6RQ06
    Related
    ENSCARP00000083434.1, ENSCART00000091110.1

  2. XM_026291635.1 → XP_026147420.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A6P6RQ06

  3. XM_026291634.1 → XP_026147419.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A6P6RQ06

  4. XM_026291633.1 → XP_026147418.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A6P6RQ06
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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