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si:ch73-62b13.1 Carbohydrate sulfotransferase 1-like [ Carassius auratus (goldfish) ]

Gene ID: 113118777, updated on 15-Mar-2024

Summary

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Gene symbol
si:ch73-62b13.1
Gene description
Carbohydrate sulfotransferase 1-like
See related
Ensembl:ENSCARG00000003942
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
Orthologs
zebrafish all
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Genomic context

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See si:ch73-62b13.1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 18 NC_039260.1 (7161261..7169875)

Chromosome 18 - NC_039260.1Genomic Context describing neighboring genes Neighboring gene dihydrofolate reductase-like Neighboring gene transcription termination factor 2, mitochondrial-like Neighboring gene SIRT1 domain-containing protein Neighboring gene transmembrane protein 263

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039260.1 Chromosome 18 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratan sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039260.1 Reference ASM336829v1 Primary Assembly

    Range
    7161261..7169875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026288192.1 → XP_026143977.1  carbohydrate sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A6P6REU6
    Related
    ENSCARP00000008480.1, ENSCART00000008962.1
Nucleotide Protein Strain
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Molecular Biology Databases