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LOC113115852 telethonin-like [ Carassius auratus (goldfish) ]

Gene ID: 113115852, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113115852
Gene description
telethonin-like
See related
Ensembl:ENSCARG00000006770
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113115852 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 16 NC_039258.1 (5103549..5105452)

Chromosome 16 - NC_039258.1Genomic Context describing neighboring genes Neighboring gene squalene epoxidase a Neighboring gene E3 ubiquitin-protein ligase RNF144B-like Neighboring gene mitochondrial ribosomal protein L32 Neighboring gene proteasome 20S subunit alpha 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039258.1 Chromosome 16 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac muscle tissue morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of muscle stretch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle myosin thick filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telethonin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039258.1 Reference ASM336829v1 Primary Assembly

    Range
    5103549..5105452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026283520.1 → XP_026139305.1  telethonin-like

    UniProtKB/TrEMBL
    A0A6P6R2Z4
    Related
    ENSCARP00000014461.1, ENSCART00000015281.1
Nucleotide Protein Strain
Heading Accession and Version

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