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LOC113114945 kin of IRRE-like protein 1 [ Carassius auratus (goldfish) ]

Gene ID: 113114945, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113114945
Gene description
kin of IRRE-like protein 1
See related
Ensembl:ENSCARG00000005196
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113114945 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 15 NC_039257.1 (8227841..8271666, complement)

Chromosome 15 - NC_039257.1Genomic Context describing neighboring genes Neighboring gene amyloid-like protein 1 Neighboring gene suppressor of tumorigenicity 14 protein homolog Neighboring gene nephrin-like Neighboring gene uncharacterized LOC113114948

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039257.1 Chromosome 15 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039257.1 Reference ASM336829v1 Primary Assembly

    Range
    8227841..8271666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026282073.1 → XP_026137858.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A6P6QX63
    Related
    ENSCARP00000011204.1, ENSCART00000011823.1
Nucleotide Protein Strain
Heading Accession and Version

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