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LOC113109784 secreted frizzled-related protein 1-like [ Carassius auratus (goldfish) ]

Gene ID: 113109784, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113109784
Gene description
secreted frizzled-related protein 1-like
See related
Ensembl:ENSCARG00000015247
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113109784 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 10 NC_039252.1 (10074463..10078761)

Chromosome 10 - NC_039252.1Genomic Context describing neighboring genes Neighboring gene lysyl oxidase homolog 2A Neighboring gene golgin subfamily A member 7-like Neighboring gene zinc finger matrin-type protein 4-like Neighboring gene transcriptional and immune response regulator-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039252.1 Chromosome 10 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039252.1 Reference ASM336829v1 Primary Assembly

    Range
    10074463..10078761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026273545.1 → XP_026129330.1  secreted frizzled-related protein 1-like

    UniProtKB/TrEMBL
    A0A6P6QBA0
    Related
    ENSCARP00000034928.1, ENSCART00000036529.1
Nucleotide Protein Strain
Heading Accession and Version

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