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LOC113069927 torsin-1A-interacting protein 2-like [ Carassius auratus (goldfish) ]

Gene ID: 113069927, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113069927
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113069927 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) Unplaced Scaffold NW_020523459.1 (1973336..1989149, complement)

NW_020523459.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113069926 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene aldehyde dehydrogenase family 9 member A1-A Neighboring gene uncharacterized LOC113069932

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020523459 Unplaced Scaffold Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamic acid-rich protein-like; probable serine/threonine-protein kinase kinX; sarcoplasmic reticulum histidine-rich calcium-binding protein-like; torsin-1A-interacting protein 2-like; trichohyalin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NW_020523459.1 Reference ASM336829v1 Primary Assembly

    Range
    1973336..1989149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026243063.1 → XP_026098848.1  probable serine/threonine-protein kinase kinX isoform X1

    UniProtKB/TrEMBL
    A0A6P6MQ87

  2. XM_026243068.1 → XP_026098853.1  probable serine/threonine-protein kinase kinX isoform X4

    UniProtKB/TrEMBL
    A0A6P6MR14

  3. XM_026243065.1 → XP_026098850.1  probable serine/threonine-protein kinase kinX isoform X2

    UniProtKB/TrEMBL
    A0A6P6MQ92

  4. XM_026243078.1 → XP_026098863.1  torsin-1A-interacting protein 2-like isoform X14

    UniProtKB/TrEMBL
    A0A6P6MR26

  5. XM_026243079.1 → XP_026098864.1  torsin-1A-interacting protein 2-like isoform X15

    UniProtKB/TrEMBL
    A0A6P6MRF5

  6. XM_026243073.1 → XP_026098858.1  sarcoplasmic reticulum histidine-rich calcium-binding protein-like isoform X9

    UniProtKB/TrEMBL
    A0A6P6MR20

  7. XM_026243077.1 → XP_026098862.1  torsin-1A-interacting protein 2-like isoform X13

    UniProtKB/TrEMBL
    A0A6P6MQQ1

  8. XM_026243069.1 → XP_026098854.1  trichohyalin-like isoform X5

    UniProtKB/TrEMBL
    A0A6P6MRE5

  9. XM_026243080.1 → XP_026098865.1  torsin-1A-interacting protein 2-like isoform X16

    UniProtKB/TrEMBL
    A0A6P6MQA6

  10. XM_026243075.1 → XP_026098860.1  torsin-1A-interacting protein 2-like isoform X11

    UniProtKB/TrEMBL
    A0A6P6MQA1

  11. XM_026243074.1 → XP_026098859.1  trichohyalin-like isoform X10

    UniProtKB/TrEMBL
    A0A6P6MRF0

  12. XM_026243071.1 → XP_026098856.1  trichohyalin-like isoform X7

    UniProtKB/TrEMBL
    A0A6P6MRZ9

  13. XM_026243070.1 → XP_026098855.1  glutamic acid-rich protein-like isoform X6

    UniProtKB/TrEMBL
    A0A6P6MQ97

  14. XM_026243076.1 → XP_026098861.1  torsin-1A-interacting protein 2-like isoform X12

    UniProtKB/TrEMBL
    A0A6P6MS04

  15. XM_026243072.1 → XP_026098857.1  trichohyalin-like isoform X8

    UniProtKB/TrEMBL
    A0A6P6MQP8

  16. XM_026243060.1 → XP_026098845.1  probable serine/threonine-protein kinase kinX isoform X1

    UniProtKB/TrEMBL
    A0A6P6MQ87

  17. XM_026243067.1 → XP_026098852.1  probable serine/threonine-protein kinase kinX isoform X3

    UniProtKB/TrEMBL
    A0A6P6MQP4

  18. XM_026243061.1 → XP_026098846.1  probable serine/threonine-protein kinase kinX isoform X1

    UniProtKB/TrEMBL
    A0A6P6MQ87

  19. XM_026243062.1 → XP_026098847.1  probable serine/threonine-protein kinase kinX isoform X1

    UniProtKB/TrEMBL
    A0A6P6MQ87

  20. XM_026243064.1 → XP_026098849.1  probable serine/threonine-protein kinase kinX isoform X1

    UniProtKB/TrEMBL
    A0A6P6MQ87
Nucleotide Protein Strain
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