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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein-like [ Carassius auratus (goldfish) ]

Gene ID: 113068696, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein-like
See related
Ensembl:ENSCARG00000039959
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: LG48F
Exon count:
9
Annotation release Status Assembly LG Location
100 current ASM336829v1 (GCF_003368295.1) LG48F NC_039300.1 (3422749..3434450)

Linkage Group LG48F - NC_039300.1Genomic Context describing neighboring genes Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like Neighboring gene necdin-like 2 Neighboring gene tafazzin, phospholipid-lysophospholipid transacylase Neighboring gene ATPase H+ transporting accessory protein 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039300.1 Chromosome LG48F Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039300.1 Reference ASM336829v1 Primary Assembly

    Range
    3422749..3434450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026241531.1 → XP_026097316.1  mitochondrial carnitine/acylcarnitine carrier protein-like

    UniProtKB/TrEMBL
    A0A6P6MMN4
    Related
    ENSCARP00000083022.1, ENSCART00000090663.1

RNA

  1. XR_003279587.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases