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LOC113063485 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like [ Carassius auratus (goldfish) ]

Gene ID: 113063485, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113063485
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like
See related
Ensembl:ENSCARG00000054600
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113063485 in Genome Data Viewer
Location:
chromosome: 45
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 45 NC_039287.1 (18556696..18579933, complement)

Chromosome 45 - NC_039287.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat and fibronectin type-III domain-containing protein 2-like Neighboring gene uncharacterized LOC113063484 Neighboring gene small nucleolar RNA U3 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039287.1 Chromosome 45 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039287.1 Reference ASM336829v1 Primary Assembly

    Range
    18556696..18579933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026233926.1 → XP_026089711.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A6P6M1M5
    Related
    ENSCARP00000106550.1, ENSCART00000119010.1

  2. XM_026233923.1 → XP_026089708.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6P6LYZ4

  3. XM_026233925.1 → XP_026089710.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6P6LYZ4
    Related
    ENSCARP00000106530.1, ENSCART00000118988.1
Nucleotide Protein Strain
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