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LOC113060909 C-terminal-binding protein 2-like [ Carassius auratus (goldfish) ]

Gene ID: 113060909, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113060909
Gene description
C-terminal-binding protein 2-like
See related
Ensembl:ENSCARG00000047656
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113060909 in Genome Data Viewer
Location:
chromosome: 42
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 42 NC_039284.1 (17399524..17440443, complement)

Chromosome 42 - NC_039284.1Genomic Context describing neighboring genes Neighboring gene neuronal PAS domain-containing protein 3-like Neighboring gene frizzled-3-like Neighboring gene keratinocyte-associated protein 3-like Neighboring gene erythroid differentiation-related factor 1-like Neighboring gene tonsoku-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039284.1 Chromosome 42 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2-like; proline-rich protein 36-like; uncharacterized protein LOC113060909

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039284.1 Reference ASM336829v1 Primary Assembly

    Range
    17399524..17440443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026230173.1 → XP_026085958.1  C-terminal-binding protein 2-like isoform X5

    UniProtKB/TrEMBL
    A0A6P6LN36
    Related
    ENSCARP00000096172.1, ENSCART00000106759.1

  2. XM_026230169.1 → XP_026085954.1  proline-rich protein 36-like isoform X1

    UniProtKB/TrEMBL
    A0A6P6LN68
    Related
    ENSCARP00000096450.1, ENSCART00000107087.1

  3. XM_026230171.1 → XP_026085956.1  uncharacterized protein LOC113060909 isoform X3

    UniProtKB/TrEMBL
    A0A6P6LR24

  4. XM_026230174.1 → XP_026085959.1  C-terminal-binding protein 2-like isoform X6

    UniProtKB/TrEMBL
    A0A6P6LN73
    Related
    ENSCARP00000096558.1, ENSCART00000107225.1

  5. XM_026230170.1 → XP_026085955.1  proline-rich protein 36-like isoform X2

    UniProtKB/TrEMBL
    A0A6P6LN33

  6. XM_026230172.1 → XP_026085957.1  proline-rich protein 36-like isoform X4

    UniProtKB/TrEMBL
    A0A6P6LQE1
    Related
    ENSCARP00000096306.1, ENSCART00000106899.1
Nucleotide Protein Strain
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