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LOC113057874 C1GALT1-specific chaperone 1-like [ Carassius auratus (goldfish) ]

Gene ID: 113057874, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113057874
Gene description
C1GALT1-specific chaperone 1-like
See related
Ensembl:ENSCARG00000012061
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113057874 in Genome Data Viewer
Location:
chromosome: 39
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 39 NC_039281.1 (10737688..10742724)

Chromosome 39 - NC_039281.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-gamma-like Neighboring gene neuroblast differentiation-associated protein AHNAK-like Neighboring gene palmitoyltransferase ZDHHC9-like Neighboring gene malignant T-cell-amplified sequence 1 Neighboring gene cullin-4B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039281.1 Chromosome 39 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039281.1 Reference ASM336829v1 Primary Assembly

    Range
    10737688..10742724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026225431.1 → XP_026081216.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A6P6L9I8
    Related
    ENSCARP00000027086.1, ENSCART00000028400.1

  2. XM_026225430.1 → XP_026081215.1  C1GALT1-specific chaperone 1-like

    UniProtKB/TrEMBL
    A0A6P6L9I8
Nucleotide Protein Strain
Heading Accession and Version

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