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LOC113040353 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like [ Carassius auratus (goldfish) ]

Gene ID: 113040353, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113040353
Gene description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like
See related
Ensembl:ENSCARG00000001911
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC113040353 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 2 NC_039244.1 (7128735..7196789)

Chromosome 2 - NC_039244.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily B member 4-like Neighboring gene coatomer subunit epsilon-like Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like Neighboring gene nucleoprotein TPR-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039244.1 Chromosome 2 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039244.1 Reference ASM336829v1 Primary Assembly

    Range
    7128735..7196789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026198712.1 → XP_026054497.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like

    UniProtKB/TrEMBL
    A0A6P6J9G7
    Related
    ENSCARP00000004127.1, ENSCART00000004372.1
Nucleotide Protein Strain
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