U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC113038780 beta-1,3-galactosyltransferase 2-like [ Carassius auratus (goldfish) ]

Gene ID: 113038780, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC113038780
Gene description
beta-1,3-galactosyltransferase 2-like
See related
Ensembl:ENSCARG00000000775
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC113038780 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 2 NC_039244.1 (27011544..27016237, complement)

Chromosome 2 - NC_039244.1Genomic Context describing neighboring genes Neighboring gene GREB1-like protein Neighboring gene phospholipase ABHD3-like Neighboring gene parafibromin-like Neighboring gene potassium channel subfamily T member 2-like Neighboring gene uncharacterized LOC113111153

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039244.1 Chromosome 2 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039244.1 Reference ASM336829v1 Primary Assembly

    Range
    27011544..27016237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026196430.1 → XP_026052215.1  beta-1,3-galactosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A6P6IWU9
    Related
    ENSCARP00000001491.1, ENSCART00000001602.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases