U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC113026014 enhancer of mRNA decapping 3 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113026014, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC113026014
Gene description
enhancer of mRNA decapping 3
See related
Ensembl:ENSACLG00000018776
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Also known as
edc3
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC113026014 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 1 NC_039302.1 (31391612..31417483, complement)

Chromosome 1 - NC_039302.1Genomic Context describing neighboring genes Neighboring gene complexin 3b Neighboring gene C-terminal Src kinase Neighboring gene cytochrome P450, family 1, subfamily A Neighboring gene collagen and calcium-binding EGF domain-containing protein 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039302.1 Chromosome 1 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
enhancer of mRNA-decapping protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039302.1 Reference fAstCal1.2 Primary Assembly

    Range
    31391612..31417483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026174394.1 → XP_026030179.1  enhancer of mRNA-decapping protein 3 isoform X2

    Conserved Domains (2) summary
    cd01737
    Location:2 → 65
    LSm16_N; Like-Sm protein 16, N-terminal domain
    pfam03853
    Location:216 → 380
    YjeF_N; YjeF-related protein N-terminus

  2. XM_026174377.1 → XP_026030162.1  enhancer of mRNA-decapping protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3P8QEC4
    Related
    ENSACLP00000027626.1, ENSACLT00000028274.1

  3. XM_026174385.1 → XP_026030170.1  enhancer of mRNA-decapping protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3P8QEC4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.