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COLEC12 collectin subfamily member 12 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112997004, updated on 10-Oct-2024

Summary

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Gene symbol
COLEC12
Gene description
collectin subfamily member 12
See related
Ensembl:ENSDNVG00000005550
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See COLEC12 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 2 NC_088099.1 (118546675..118647523)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020454048.1 (1490576..1579171, complement)

Chromosome 2 - NC_088099.1Genomic Context describing neighboring genes Neighboring gene clusterin like 1 Neighboring gene uncharacterized LOC112996986 Neighboring gene THO complex subunit 1 Neighboring gene ubiquitin specific peptidase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088099.1 Reference bDroNov1.hap1

    Range
    118546675..118647523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064507276.1 → XP_064363346.1  collectin-12 isoform X1

  2. XM_064507277.1 → XP_064363347.1  collectin-12 isoform X2

    UniProtKB/TrEMBL
    A0A8C4JFM0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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