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SPAM1 sperm adhesion molecule 1 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112990915, updated on 19-Apr-2024

Summary

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Gene symbol
SPAM1
Gene description
sperm adhesion molecule 1
See related
Ensembl:ENSDNVG00000015735
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human all
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Genomic context

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See SPAM1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 1 NC_088098.1 (20705766..20717094, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020453515.1 (4104131..4113674, complement)

Chromosome 1 - NC_088098.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 37 Neighboring gene ADP-ribosylation factor-like protein 8B Neighboring gene hyaluronidase-1-like Neighboring gene hyaluronidase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase PH-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088098.1 Reference bDroNov1.hap1

    Range
    20705766..20717094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026112991.2 → XP_025968776.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A7K9ARW4, A0A8C4KCK4
    Related
    ENSDNVP00000022628.1
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 373
    Glyco_hydro_56; Hyaluronidase
Nucleotide Protein
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Gene LinkOut

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