U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNTN2 contactin 2 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112990311, updated on 19-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
CNTN2
Gene description
contactin 2
See related
Ensembl:ENSDNVG00000013353
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CNTN2 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 27 NC_088124.1 (4987689..5015519)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020453482.1 (2881621..2898239, complement)

Chromosome 27 - NC_088124.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat neuronal 2 Neighboring gene neurofascin Neighboring gene transmembrane protein 81 Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
contactin-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088124.1 Reference bDroNov1.hap1

    Range
    4987689..5015519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026111963.2 → XP_025967748.1  contactin-2

    UniProtKB/TrEMBL
    A0A7K9AVQ2, A0A8C4KA62
    Related
    ENSDNVP00000019090.1
    Conserved Domains (6) summary
    cd05727
    Location:126 → 223
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05728
    Location:323 → 407
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd00063
    Location:613 → 700
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:810 → 896
    fn3; Fibronectin type III domain
    cd04969
    Location:428 → 500
    Ig5_Contactin; Fifth immunoglobulin (Ig) domain of contactin
    cl11960
    Location:31 → 124
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.