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B4GALT4 beta-1,4-galactosyltransferase 4 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112989408, updated on 10-Oct-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
See related
Ensembl:ENSDNVG00000001816
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 1 NC_088098.1 (90900468..90933209)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020453450.1 (127394..160072, complement)

Chromosome 1 - NC_088098.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 1 like Neighboring gene uncharacterized LOC112989417 Neighboring gene transmembrane protein 39A Neighboring gene beta-1,4-galactosyltransferase 3-like Neighboring gene uncharacterized LOC135329919 Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088098.1 Reference bDroNov1.hap1

    Range
    90900468..90933209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026110556.2 → XP_025966341.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A7K9ATV7, A0A8C4J5Z8
    Related
    ENSDNVP00000002521.1
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_026110555.2 → XP_025966340.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A7K9ATV7, A0A8C4J5Z8
    Related
    ENSDNVP00000002532.1
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_064520050.1 → XP_064376120.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C4J5Z8

  4. XM_064520069.1 → XP_064376139.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C4J5Z8

  5. XM_026110557.2 → XP_025966342.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A7K9ATV7, A0A8C4J5Z8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  6. XM_064520060.1 → XP_064376130.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C4J5Z8

  7. XM_064520074.1 → XP_064376144.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C4J5Z8

  8. XM_064520046.1 → XP_064376116.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C4J5Z8

  9. XM_026110554.2 → XP_025966339.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A7K9ATV7, A0A8C4J5Z8
    Related
    ENSDNVP00000002538.1
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  10. XM_026110558.2 → XP_025966343.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A7K9ATV7, A0A8C4J5Z8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  11. XM_026110553.2 → XP_025966338.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A7K9ATV7, A0A8C4J5Z8
    Related
    ENSDNVP00000002546.1
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  12. XM_064520086.1 → XP_064376156.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C4J5Z8
Nucleotide Protein
Heading Accession and Version

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