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TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112988802, updated on 19-Apr-2024

Summary

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Gene symbol
TMTC3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
See related
Ensembl:ENSDNVG00000018472
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See TMTC3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 1 NC_088098.1 (44445750..44482682)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020453425.1 (298044..334770)

Chromosome 1 - NC_088098.1Genomic Context describing neighboring genes Neighboring gene chromosome 1 C12orf50 homolog Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene centrosomal protein 290 Neighboring gene uncharacterized LOC135328491 Neighboring gene KIT ligand

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC3
Names
transmembrane and tetratricopeptide repeat containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088098.1 Reference bDroNov1.hap1

    Range
    44445750..44482682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026109541.2 → XP_025965326.1  protein O-mannosyl-transferase TMTC3

    UniProtKB/TrEMBL
    A0A7K9APA8, A0A8C4KTJ2
    Conserved Domains (4) summary
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:259 → 331
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:438 → 808
    TPR_11; TPR repeat
    cl26511
    Location:787 → 907
    Neuromodulin_N; Gap junction protein N-terminal region

  2. XM_026109540.2 → XP_025965325.1  protein O-mannosyl-transferase TMTC3

    UniProtKB/TrEMBL
    A0A7K9APA8, A0A8C4KTJ2
    Conserved Domains (4) summary
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:259 → 331
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:438 → 808
    TPR_11; TPR repeat
    cl26511
    Location:787 → 907
    Neuromodulin_N; Gap junction protein N-terminal region

  3. XM_026109542.2 → XP_025965327.1  protein O-mannosyl-transferase TMTC3

    UniProtKB/TrEMBL
    A0A7K9APA8, A0A8C4KTJ2
    Related
    ENSDNVP00000026568.1
    Conserved Domains (4) summary
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:259 → 331
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:438 → 808
    TPR_11; TPR repeat
    cl26511
    Location:787 → 907
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
Heading Accession and Version

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