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LPIN1 lipin 1 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112981499, updated on 19-Apr-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
See related
Ensembl:ENSDNVG00000011120
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 3 NC_088100.1 (15992952..16043633, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020452205.1 (3150801..3201232, complement)

Chromosome 3 - NC_088100.1Genomic Context describing neighboring genes Neighboring gene tribbles pseudokinase 2 Neighboring gene uncharacterized LOC135327804 Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene uncharacterized LOC112981496

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088100.1 Reference bDroNov1.hap1

    Range
    15992952..16043633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064508454.1 → XP_064364524.1  phosphatidate phosphatase LPIN1 isoform X1

  2. XM_026097173.2 → XP_025952958.2  phosphatidate phosphatase LPIN1 isoform X1

  3. XM_064508455.1 → XP_064364525.1  phosphatidate phosphatase LPIN1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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