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PLCH1 phospholipase C eta 1 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112981334, updated on 19-Apr-2024

Summary

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Gene symbol
PLCH1
Gene description
phospholipase C eta 1
See related
Ensembl:ENSDNVG00000004643
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See PLCH1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 9 NC_088106.1 (2266064..2362864, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020452139.1 (1183625..1267547)

Chromosome 9 - NC_088106.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 149 Neighboring gene membrane metalloendopeptidase Neighboring gene chromosome 9 C3orf33 homolog Neighboring gene solute carrier family 33 member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in release of sequestered calcium ion into cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088106.1 Reference bDroNov1.hap1

    Range
    2266064..2362864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064516512.1 → XP_064372582.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X3

  2. XM_064516511.1 → XP_064372581.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X2

  3. XM_026096891.2 → XP_025952676.2  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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