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CHST9 carbohydrate sulfotransferase 9 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112980797, updated on 10-Oct-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
See related
Ensembl:ENSDNVG00000005274
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See CHST9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 2 NC_088099.1 (121232363..121326460, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020452006.1 (1268666..1355051)

Chromosome 2 - NC_088099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135327590 Neighboring gene aquaporin 4 Neighboring gene large ribosomal subunit protein eL13-like Neighboring gene cadherin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088099.1 Reference bDroNov1.hap1

    Range
    121232363..121326460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064507342.1 → XP_064363412.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8C4JEU0

  2. XM_026095958.2 → XP_025951743.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8C4JEU0
    Related
    ENSDNVP00000007388.1
    Conserved Domains (1) summary
    pfam03567
    Location:177 → 406
    Sulfotransfer_2; Sulfotransferase family

  3. XM_064507346.1 → XP_064363416.1  carbohydrate sulfotransferase 9 isoform X2

  4. XM_064507343.1 → XP_064363413.1  carbohydrate sulfotransferase 9 isoform X2

  5. XM_064507345.1 → XP_064363415.1  carbohydrate sulfotransferase 9 isoform X2

  6. XM_064507341.1 → XP_064363411.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8C4JEU0

  7. XM_064507348.1 → XP_064363418.1  carbohydrate sulfotransferase 9 isoform X2

  8. XM_026095959.2 → XP_025951744.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A7K9AN71
    Conserved Domains (1) summary
    pfam03567
    Location:104 → 333
    Sulfotransfer_2; Sulfotransferase family

  9. XM_064507344.1 → XP_064363414.1  carbohydrate sulfotransferase 9 isoform X2

  10. XM_064507347.1 → XP_064363417.1  carbohydrate sulfotransferase 9 isoform X2

Nucleotide Protein
Heading Accession and Version

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