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LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112979583, updated on 19-Apr-2024

Summary

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Gene symbol
LPCAT1
Gene description
lysophosphatidylcholine acyltransferase 1
See related
Ensembl:ENSDNVG00000012466
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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See LPCAT1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 2 NC_088099.1 (70456088..70526361, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020451773.1 (97971..168207, complement)

Chromosome 2 - NC_088099.1Genomic Context describing neighboring genes Neighboring gene sodium-dependent neutral amino acid transporter B(0)AT3-like Neighboring gene telomerase reverse transcriptase Neighboring gene CLPTM1 like Neighboring gene NADH:ubiquinone oxidoreductase subunit S6 Neighboring gene uncharacterized LOC112979592 Neighboring gene iroquois homeobox 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerophosphocholine O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lysophosphatidic acid acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088099.1 Reference bDroNov1.hap1

    Range
    70456088..70526361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026093896.2 → XP_025949681.2  lysophosphatidylcholine acyltransferase 1 isoform X2

  2. XM_026093895.2 → XP_025949680.2  lysophosphatidylcholine acyltransferase 1 isoform X1

  3. XM_026093898.2 → XP_025949683.2  lysophosphatidylcholine acyltransferase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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