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PGAP2 post-GPI attachment to proteins 2 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112978635, updated on 15-Mar-2024

Summary

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Gene symbol
PGAP2
Gene description
post-GPI attachment to proteins 2
See related
Ensembl:ENSARWG00000003455
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See PGAP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451263.1 (45925..56016)

NW_020451263.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 10 subunit Neighboring gene nucleoporin 98 and 96 precursor Neighboring gene ras homolog family member G Neighboring gene stromal interaction molecule 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020451263 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451263.1 Reference aptRow1

    Range
    45925..56016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026092280.1 → XP_025948065.1  post-GPI attachment to proteins factor 2 isoform X3

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 240
    Frag1; Frag1/DRAM/Sfk1 family

  2. XM_026092278.1 → XP_025948063.1  post-GPI attachment to proteins factor 2 isoform X1

    Related
    ENSARWP00000004777.1, ENSARWT00000005491.1
    Conserved Domains (1) summary
    pfam10277
    Location:18 → 241
    Frag1; Frag1/DRAM/Sfk1 family

  3. XM_026092279.1 → XP_025948064.1  post-GPI attachment to proteins factor 2 isoform X2

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 237
    Frag1; Frag1/DRAM/Sfk1 family
Nucleotide Protein
Heading Accession and Version

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