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GALNS galactosamine (N-acetyl)-6-sulfatase [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112978484, updated on 15-Mar-2024

Summary

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Gene symbol
GALNS
Gene description
galactosamine (N-acetyl)-6-sulfatase
See related
Ensembl:ENSARWG00000010879
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See GALNS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451249.1 (2330338..2375438, complement)

NW_020451249.1Genomic Context describing neighboring genes Neighboring gene chromatin licensing and DNA replication factor 1 Neighboring gene adenine phosphoribosyltransferase Neighboring gene trafficking protein particle complex subunit 2L Neighboring gene PABPN1 like, cytoplasmic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020451249 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arylsulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine-6-sulfatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451249.1 Reference aptRow1

    Range
    2330338..2375438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026092052.1 → XP_025947837.1  N-acetylgalactosamine-6-sulfatase isoform X2

    Related
    ENSARWP00000015775.1, ENSARWT00000017978.1
    Conserved Domains (1) summary
    cd16157
    Location:1 → 455
    GALNS; galactosamine-6-sulfatase; also known as N-acetylgalactosamine-6-sulfatase (GALNS)

  2. XM_026092051.1 → XP_025947836.1  N-acetylgalactosamine-6-sulfatase isoform X1

    Related
    ENSARWP00000015773.1, ENSARWT00000017976.1
    Conserved Domains (1) summary
    cl23718
    Location:1 → 416
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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