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SACM1L SAC1 like phosphatidylinositide phosphatase [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112978347, updated on 15-Mar-2024

Summary

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Gene symbol
SACM1L
Gene description
SAC1 like phosphatidylinositide phosphatase
See related
Ensembl:ENSARWG00000006393
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See SACM1L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451228.1 (179080..212286)

NW_020451228.1Genomic Context describing neighboring genes Neighboring gene LIM domain containing 1 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene small nuclear ribonucleoprotein D1 polypeptide Neighboring gene solute carrier family 6 member 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020451228 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451228.1 Reference aptRow1

    Range
    179080..212286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026091750.1 → XP_025947535.1  phosphatidylinositide phosphatase SAC1 isoform X2

    Related
    ENSARWP00000009144.1, ENSARWT00000010437.1
    Conserved Domains (1) summary
    COG5329
    Location:65 → 504
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]

  2. XM_026091749.1 → XP_025947534.1  phosphatidylinositide phosphatase SAC1 isoform X1

    Related
    ENSARWP00000009143.1, ENSARWT00000010436.1
    Conserved Domains (1) summary
    COG5329
    Location:65 → 527
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]

  3. XM_026091751.1 → XP_025947536.1  phosphatidylinositide phosphatase SAC1 isoform X3

    Related
    ENSARWP00000009146.1, ENSARWT00000010439.1
    Conserved Domains (1) summary
    COG5329
    Location:65 → 477
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]

  4. XM_026091752.1 → XP_025947537.1  phosphatidylinositide phosphatase SAC1 isoform X4

    Conserved Domains (1) summary
    COG5329
    Location:22 → 416
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]

RNA

  1. XR_003257871.1 RNA Sequence

Nucleotide Protein
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