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LCT lactase [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112977064, updated on 15-Mar-2024

Summary

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Gene symbol
LCT
Gene description
lactase
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See LCT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451093.1 (2547205..2574088, complement)

NW_020451093.1Genomic Context describing neighboring genes Neighboring gene zinc finger RANBP2-type containing 3 Neighboring gene R3H domain containing 1 Neighboring gene uncharacterized LOC112977059 Neighboring gene UBX domain protein 4 Neighboring gene uncharacterized LOC112977061 Neighboring gene minichromosome maintenance complex component 6 Neighboring gene aspartyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020451093 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-phlorizin hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451093.1 Reference aptRow1

    Range
    2547205..2574088 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026088962.1 → XP_025944747.1  lactase-phlorizin hydrolase

    Conserved Domains (2) summary
    pfam00232
    Location:899 → 1364
    Glyco_hydro_1; Glycosyl hydrolase family 1
    cl23725
    Location:376 → 845
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

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