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AKR1A1 aldo-keto reductase family 1 member A1 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112975918, updated on 11-Apr-2024

Summary

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Gene symbol
AKR1A1
Gene description
aldo-keto reductase family 1 member A1
See related
Ensembl:ENSARWG00000000149
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See AKR1A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450982.1 (5180193..5201474, complement)

NW_020450982.1Genomic Context describing neighboring genes Neighboring gene GC-rich promoter binding protein 1 like 1 Neighboring gene nuclear autoantigenic sperm protein Neighboring gene peroxiredoxin 1 Neighboring gene spindle assembly abnormal protein 6 homolog Neighboring gene metabolism of cobalamin associated C Neighboring gene flocculation protein FLO11-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020450982 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aldehyde catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alcohol dehydrogenase [NADP(+)]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020450982.1 Reference aptRow1

    Range
    5180193..5201474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026086589.1 → XP_025942374.1  alcohol dehydrogenase [NADP(+)] isoform X4

    Related
    ENSARWP00000000152.1, ENSARWT00000000191.1
    Conserved Domains (1) summary
    COG0656
    Location:7 → 305
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]

  2. XM_026086587.1 → XP_025942372.1  alcohol dehydrogenase [NADP(+)] isoform X2

    Conserved Domains (1) summary
    COG0656
    Location:1 → 192
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]

  3. XM_026086586.1 → XP_025942371.1  alcohol dehydrogenase [NADP(+)] isoform X2

    Conserved Domains (1) summary
    COG0656
    Location:1 → 192
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]

  4. XM_026086584.1 → XP_025942369.1  alcohol dehydrogenase [NADP(+)] isoform X1

    Conserved Domains (1) summary
    COG0656
    Location:16 → 290
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]

  5. XM_026086588.1 → XP_025942373.1  alcohol dehydrogenase [NADP(+)] isoform X3

    Conserved Domains (1) summary
    COG0656
    Location:4 → 171
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
Nucleotide Protein
Heading Accession and Version

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